I am running xtgee to assess the association between change in heart dimension (pch_rveda) and time from enrollment (tfe) expecting that the heart will get bigger as time goes by. I like to plot this linear association (test for nonlinearity was not significant) between rveda and tfe using the numbers from adjusted model. I cannot find any command that would do that and my search here was not successful. I apologize if this is very simple question but I have not done this before. I use Stata/SE 16.0.
Thank you
. dataex newid date pch_rveda rveda blrveda blage gender racecat site tfe
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Code:
* Example generated by -dataex-. To install: ssc install dataex
clear
input byte newid int date float pch_rveda double rveda float(blrveda blage) byte gender float(racecat site tfe)
1 17195 . 18.89 18.89 31.712526 1 0 1 0
1 17391 . . 18.89 31.712526 1 0 1 .5366192
1 17643 . . 18.89 31.712526 1 0 1 1.2265568
1 18077 . . 18.89 31.712526 1 0 1 2.4147854
1 18281 . . 18.89 31.712526 1 0 1 2.973307
1 18465 1.9057735 19.25 18.89 31.712526 1 0 1 3.477068
1 18742 . . 18.89 31.712526 1 0 1 4.2354527
1 18854 23.55744 23.34 18.89 31.712526 1 0 1 4.5420933
1 18938 . . 18.89 31.712526 1 0 1 4.772074
1 19026 . . 18.89 31.712526 1 0 1 5.013002
1 19246 . . 18.89 31.712526 1 0 1 5.615332
1 19260 . . 18.89 31.712526 1 0 1 5.653662
1 19285 17.151936 22.13 18.89 31.712526 1 0 1 5.722109
1 19296 . . 18.89 31.712526 1 0 1 5.752222
1 19297 . . 18.89 31.712526 1 0 1 5.754961
1 19428 . . 18.89 31.712526 1 0 1 6.113619
1 19456 . . 18.89 31.712526 1 0 1 6.190279
1 19457 11.964005 21.15 18.89 31.712526 1 0 1 6.193018
1 19486 . . 18.89 31.712526 1 0 1 6.272417
1 19501 . . 18.89 31.712526 1 0 1 6.313482
1 19590 . . 18.89 31.712526 1 0 1 6.557154
1 20177 23.92801 23.41 18.89 31.712526 1 0 1 8.16427
1 21108 3.229225 19.5 18.89 31.712526 1 0 1 10.71321
2 18018 . 22.46 22.46 23.22245 1 0 1 0
2 18037 . . 22.46 23.22245 1 0 1 .05201912
2 18038 . . 22.46 23.22245 1 0 1 .05475807
2 18455 . . 22.46 23.22245 1 0 1 1.1964417
2 18770 . . 22.46 23.22245 1 0 1 2.0588646
2 19303 13.357084 25.46 22.46 23.22245 1 0 1 3.518139
2 19470 . . 22.46 23.22245 1 0 1 3.975359
2 20079 19.41229 26.82 22.46 23.22245 1 0 1 5.64271
2 20478 23.152275 27.66 22.46 23.22245 1 0 1 6.735113
2 20541 . . 22.46 23.22245 1 0 1 6.907598
2 21073 . . 22.46 23.22245 1 0 1 8.364134
2 21227 28.361536 28.83 22.46 23.22245 1 0 1 8.785763
2 21738 20.21372 27 22.46 23.22245 1 0 1 10.184807
3 15985 . 46.81 46.81 57.1499 2 0 1 0
3 17867 . . 46.81 57.1499 2 0 1 5.152634
3 18044 -7.199319 43.44 46.81 57.1499 2 0 1 5.637234
3 18045 . . 46.81 57.1499 2 0 1 5.639973
3 18047 . . 46.81 57.1499 2 0 1 5.645447
3 18051 . . 46.81 57.1499 2 0 1 5.656399
3 18154 . . 46.81 57.1499 2 0 1 5.938396
3 19170 . . 46.81 57.1499 2 0 1 8.720051
3 19288 . . 46.81 57.1499 2 0 1 9.043118
3 19928 16.513561 54.54 46.81 57.1499 2 0 1 10.795345
4 18324 . 30.96 30.96 44.72279 2 0 1 0
4 18358 . . 30.96 44.72279 2 0 1 .09308624
4 18368 . . 30.96 44.72279 2 0 1 .12046432
4 18784 -18.023252 25.38 30.96 44.72279 2 0 1 1.259411
4 19421 -4.877258 29.45 30.96 44.72279 2 0 1 3.003422
4 19960 -12.855294 26.98 30.96 44.72279 2 0 1 4.479122
4 20576 . . 30.96 44.72279 2 0 1 6.165638
4 20583 1.1627936 31.32 30.96 44.72279 2 0 1 6.184803
4 20703 . . 30.96 44.72279 2 0 1 6.513348
4 20898 . . 30.96 44.72279 2 0 1 7.047226
4 21112 . . 30.96 44.72279 2 0 1 7.633125
4 21143 . . 30.96 44.72279 2 0 1 7.717999
4 21507 . . 30.96 44.72279 2 0 1 8.714577
4 21627 . . 30.96 44.72279 2 0 1 9.043121
4 21636 -7.073641 28.77 30.96 44.72279 2 0 1 9.06776
4 21693 . . 30.96 44.72279 2 0 1 9.22382
4 21747 . . 30.96 44.72279 2 0 1 9.371662
5 17801 . 33.87 33.87 26.38193 1 0 1 0
5 18007 . . 33.87 26.38193 1 0 1 .56399727
5 18350 . . 33.87 26.38193 1 0 1 1.5030804
5 18508 -7.82403 31.22 33.87 26.38193 1 0 1 1.9356613
5 18700 . . 33.87 26.38193 1 0 1 2.4613285
5 18921 . . 33.87 26.38193 1 0 1 3.066393
5 19015 . . 33.87 26.38193 1 0 1 3.3237514
5 19106 . . 33.87 26.38193 1 0 1 3.572897
5 19227 . . 33.87 26.38193 1 0 1 3.904177
5 19316 . . 33.87 26.38193 1 0 1 4.1478443
5 19417 . . 33.87 26.38193 1 0 1 4.424368
5 19498 . . 33.87 26.38193 1 0 1 4.6461334
5 19499 . . 33.87 26.38193 1 0 1 4.6488724
5 19589 . . 33.87 26.38193 1 0 1 4.895279
5 19666 . . 33.87 26.38193 1 0 1 5.106092
5 19750 . . 33.87 26.38193 1 0 1 5.336073
5 19757 -4.3105965 32.41 33.87 26.38193 1 0 1 5.355236
5 19933 . . 33.87 26.38193 1 0 1 5.837099
5 20128 . . 33.87 26.38193 1 0 1 6.370981
5 20139 . . 33.87 26.38193 1 0 1 6.401094
5 20310 . . 33.87 26.38193 1 0 1 6.869268
5 20412 . . 33.87 26.38193 1 0 1 7.148531
5 20506 . . 33.87 26.38193 1 0 1 7.405886
5 20524 -14.083257 29.1 33.87 26.38193 1 0 1 7.455168
5 20614 . . 33.87 26.38193 1 0 1 7.701574
5 20699 . . 33.87 26.38193 1 0 1 7.934294
5 20716 . . 33.87 26.38193 1 0 1 7.980837
5 20717 . . 33.87 26.38193 1 0 1 7.983572
5 20730 . . 33.87 26.38193 1 0 1 8.019167
5 20779 . . 33.87 26.38193 1 0 1 8.153322
5 20828 . . 33.87 26.38193 1 0 1 8.287474
5 20865 . . 33.87 26.38193 1 0 1 8.388777
5 20888 . . 33.87 26.38193 1 0 1 8.451746
5 20912 . . 33.87 26.38193 1 0 1 8.517454
5 21038 . . 33.87 26.38193 1 0 1 8.862425
5 21115 . . 33.87 26.38193 1 0 1 9.073236
5 21159 . . 33.87 26.38193 1 0 1 9.193705
end
format %tdnn/dd/CCYY date
------------------ copy up to and including the previous line ------------------
Listed 100 out of 816 observations
Use the count() option to list more
Here is the results form the full dataset
. xtgee pch_rveda blrveda blage gender racecat site tfe, vce(robust)
Iteration 1: tolerance = 3.4858818
Iteration 2: tolerance = .03297166
Iteration 3: tolerance = .00098127
Iteration 4: tolerance = .00002973
Iteration 5: tolerance = 9.010e-07
GEE population-averaged model Number of obs = 236
Group variable: newid Number of groups = 64
Link: identity Obs per group:
Family: Gaussian min = 1
Correlation: exchangeable avg = 3.7
max = 16
Wald chi2(6) = 20.58
Scale parameter: 300.659 Prob > chi2 = 0.0022
(Std. Err. adjusted for clustering on newid)
Robust
pch_rveda Coef. Std. Err. z P>z [95% Conf. Interval]
blrveda .020357 .2438373 0.08 0.933 -.4575553 .4982694
blage -.2007481 .1445924 -1.39 0.165 -.4841439 .0826477
gender 10.51604 3.931522 2.67 0.007 2.810397 18.22168
racecat -3.87816 6.476657 -0.60 0.549 -16.57217 8.815854
site 2.771269 4.190216 0.66 0.508 -5.441404 10.98394
tfe 1.091036 .3858063 2.83 0.005 .3348693 1.847202
_cons -10.64515 13.29898 -0.80 0.423 -36.71067 15.42037
.